BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036F09LP1|AL430265
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1774 1848 0.0
>3x_Contig1774
Length = 27771
Score = 1848 bits (931), Expect = 0.0
Identities = 933/935 (99%)
Strand = Plus / Minus
Query: 1 gatcacgaaaaggacaaaaacgtgccgttgcaaacaaggttagcacaaagcggtctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6020 gatcacgaaaaggacaaaaacgtgccgttgcaaacaaggttagcacaaagcggtctggaa 5961
Query: 61 aaggtgacctggtatgggaccatttctaacaacgataccgttgccgaatcgttcgaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5960 aaggtgacctggtatgggaccatttctaacaacgataccgttgccgaatcgttcgaatca 5901
Query: 121 acttgtgagagttgttattacgcgttcattttagacaatactacttcgaagcagactaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5900 acttgtgagagttgttattacgcgttcattttagacaatactacttcgaagcagactaag 5841
Query: 181 aaaaaatgtttattttcggtgagtatcaaccctagtgcatcggcaatggaaggtttggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5840 aaaaaatgtttattttcggtgagtatcaaccctagtgcatcggcaatggaaggtttggat 5781
Query: 241 gacgatcaggaatccgtcatttcaaaccaagaggaaagctttggtgccaatgggacgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5780 gacgatcaggaatccgtcatttcaaaccaagaggaaagctttggtgccaatgggacgaat 5721
Query: 301 ggcaagcgacctttgaattatagccaaacgtcattcaaggatccatctttgtcctcatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5720 ggcaagcgacctttgaattatagccaaacgtcattcaaggatccatctttgtcctcatta 5661
Query: 361 gcaaaatcgaattccaatccatttgcgccatctccaggccagactactccaagcacaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 gcaaaatcgaattccaatccatttgcgccatctccaggccagactactccaagcacaatt 5601
Query: 421 tccaacgtgggtacatctaacggaccaaacactaattctccagtgccaathaaaccactg 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5600 tccaacgtgggtacatctaacggaccaaacactaattctccagtgccaataaaaccactg 5541
Query: 481 agtccaagttctacatccgcgacagatcacgatttgaaaaacagtaaaggattccaagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 agtccaagttctacatccgcgacagatcacgatttgaaaaacagtaaaggattccaagga 5481
Query: 541 tatttactaaaaaagaagagaaagaagctacaaggttttaccaaacggttctttaaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5480 tatttactaaaaaagaagagaaagaagctacaaggttttaccaaacggttctttaaactc 5421
Query: 601 gatataaaatttgggattctctcatattatctcaactctaaatctcctgtgtgtcgtggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5420 gatataaaatttgggattctctcatattatctcaactctaaatctcctgtgtgtcgtggt 5361
Query: 661 gagattgttgtcccactttcatcaataagtgcaaataagcaaactaaacttattatcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 gagattgttgtcccactttcatcaataagtgcaaataagcaaactaaacttattatcatt 5301
Query: 721 gactcaggcatggagatctgggtcatgaaagctcgtgacgaaaaagattgggaactttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5300 gactcaggcatggagatctgggtcatgaaagctcgtgacgaaaaagattgggaactttgg 5241
Query: 781 atttcaatgatcgagtcatgtttcaaacaagacgccccaactacttcgcaagatcacgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5240 atttcaatgatcgagtcatgtttcaaacaagacgccccaactacttcgcaagatcacgaa 5181
Query: 841 tcgcataacgttgtcattcctcctgataatgataccacagcatttttccgcaatttaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5180 tcgcataacgttgtcattcctcctgataatgataccacagcatttttccgcaatttaaca 5121
Query: 901 tccctaaggaaaagaatagaagaatgcaagtrtca 935
||||||||||||||||||||||||||||||| |||
Sbjct: 5120 tccctaaggaaaagaatagaagaatgcaagtatca 5086
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6693
Number of Sequences: 1807
Number of extensions: 6693
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)